Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015837828.1_cds_XP_016506769.1_19966
CDS Infomation

[gene=LOC107824506] [db_xref=GeneID:107824506] [protein=probable protein phosphatase 2C 34] [protein_id=XP_016506769.1] [location=complement(join(26584..26796,27258..27481,27562..27679,28231..28539,28839..29090))] [gbkey=CDS]
Sequence

ATGGGGCATTTCTCTTCAATGTTTAATGGATTGGCAAGGTCTTTTTCCTTAAAGAAAAGA
AGGAATTGTACTGGGAATGGGAAATATGATGGTAGAGAAGCTGTTGAGGCTATGGCTAAA
GAAGCCAAGAAAAATGACTTGATATTAAGGTCTTCTGGAACTGTAAATGTTGTTGGCTCT
AAAAATTTTGCTTCATTATTCTCTAGGAGAGGTGAAAAAGGAGTGAATCAAGATTGCTTC
ATTGTTTGGGAGGAATTTGGATGCCAAGAAGATATGATATTCTGTGGTATATTTGATGGG
CATGGTCCATGGGGTCATTTTGTGGCGAAGAAGGTTCGAGAATCGATGGTATCTTCGTTG
CTTTGCAATTGGCAAGAGAGTCTAGCCGAGGCTTCAGTTGATCCCGATTTAGATTTAGAT
TCTGATAAGAAGCTTCAAAGGTTTAACATATGGAAGGACTCATACCTAAAGGCATGTGCA
GCTGTAGATCAGGAGCTGGAACACCATCCTAAGATAGATACATTTTACAGTGGAACCACT
GCTTTGACAATAGTCAGACAGGGTGAGATTATTTTTATAGCAAATGTAGGTGACTCGCGT
GCTGTATTGGCTACCACTTGTGATGATGGCAACTTGGTACCAGTTCAGCTAACTATTGAT
TTCAAGCCAAATCTACCTCAGGAAACTGAGAGGATAATACAGTGTAATGGTCGAGTATTT
TGCTTAGATGATGAATCCGGGGTGCATCGATTATGGCTGCCTGATGAAGAATCCCCTGGA
TTGGCGATGTCTAGAGCCTTTGGGGACTATTGCGTTAAAGATTTTGGTCTAATTTCAGTG
CCTGATGTGACTCAAAGGCATATCACAAGCAAAGACCAATTTGTTGTGCTGGCAACTGAT
GGGGTATGGGATGTAGTCTCCAACCAAGAGGCTGTAGAAATTGTATCCACAACTCCAGAT
AGAGCAAAGGCGGCCAAGTGTCTGGTTCAATGCGCTGTCCGCGCTTGGAAACGCAAGAGA
AGAGGGATAGCTGTGGATGATATTTCTGCTATTGTACTCTTCTTTCATTCTAATCATTTC
TGTCACCATATTTACCCTGTAACTGCACCAAAATAA

Peptide Sequence

PEP ID

XP_016506769.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 34 [Nicotiana tabacum]
Sequence

MGHFSSMFNGLARSFSLKKRRNCTGNGKYDGREAVEAMAKEAKKNDLILRSSGTVNVVGS
KNFASLFSRRGEKGVNQDCFIVWEEFGCQEDMIFCGIFDGHGPWGHFVAKKVRESMVSSL
LCNWQESLAEASVDPDLDLDSDKKLQRFNIWKDSYLKACAAVDQELEHHPKIDTFYSGTT
ALTIVRQGEIIFIANVGDSRAVLATTCDDGNLVPVQLTIDFKPNLPQETERIIQCNGRVF
CLDDESGVHRLWLPDEESPGLAMSRAFGDYCVKDFGLISVPDVTQRHITSKDQFVVLATD
GVWDVVSNQEAVEIVSTTPDRAKAAKCLVQCAVRAWKRKRRGIAVDDISAIVLFFHSNHF
CHHIYPVTAPK

Transcript Sequence

Gene sequence data has not been registered.